I have been able to solve my deployment issues with both my RTD server and
Automation server.

For my RTD server I used a setup/deployment project that solved the issues I
was having when I was trying to create a manual deployment package.

My automation server was solved by adding manual steps to the deployment
process as VS 2008 seems to have a bug that prevents the server from
registering correctly. Not sure if this is a bug in VS or regasm or the
deployment process. My code was suppose to be called during the registration
process and wasn't.

The Programmable key was missing and needed to be added manually.

Michael