AFAIK, no one has found a way to change the autofilter arrow colour.
If you can use programming, there's a sample file that uses a User
Defined Function and conditional formatting to colour the heading cells:
http://www.contextures.com/excelfiles.html
under the heading 'Filters' look for 'Highlight AutoFilter Headings'
Marcel Wilmink via OfficeKB.com wrote:
When Auto Filtering is on and one of the filters is active, the button's
colour is changed to blue. Often, I find it difficult to distinct this blue
colour with the black colour of an inactive filter.
Can the colour of this blue Auto Filter button be changed?
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Debra Dalgleish
Excel FAQ, Tips & Book List
http://www.contextures.com/tiptech.html